.. DO NOT EDIT. .. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY. .. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE: .. "examples/Data/plot_tempest_dataset.py" .. LINE NUMBERS ARE GIVEN BELOW. .. only:: html .. note:: :class: sphx-glr-download-link-note :ref:`Go to the end ` to download the full example code. .. rst-class:: sphx-glr-example-title .. _sphx_glr_examples_Data_plot_tempest_dataset.py: Tempest dataset -------------------- .. GENERATED FROM PYTHON SOURCE LINES 6-13 .. code-block:: Python import h5py from geobipy import plotting as cP from os.path import join import matplotlib.pyplot as plt import numpy as np from geobipy import TempestData .. GENERATED FROM PYTHON SOURCE LINES 14-16 Reading in the Data +++++++++++++++++++ .. GENERATED FROM PYTHON SOURCE LINES 18-33 .. code-block:: Python dataFolder = "..//..//supplementary//data//" # # The data file name # dataFiles = dataFolder + 'Tempest.nc' # # The EM system file name # systemFiles = dataFolder + 'Tempest.stm' # #%% # # Read in the data from file # TD = TempestData.read_netcdf(dataFiles, systemFiles) # TD.write_csv(dataFolder + 'Tempest.csv') TD = TempestData.read_csv(dataFolder + 'tempest_saline_clay.csv', system_filename=dataFolder + 'Tempest.stm') .. rst-class:: sphx-glr-script-out .. code-block:: none self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) .. GENERATED FROM PYTHON SOURCE LINES 34-35 Plot the locations of the data points .. GENERATED FROM PYTHON SOURCE LINES 35-39 .. code-block:: Python plt.figure(figsize=(8,6)) _ = TD.scatter2D() plt.title("Scatter plot") .. image-sg:: /examples/Data/images/sphx_glr_plot_tempest_dataset_001.png :alt: Scatter plot :srcset: /examples/Data/images/sphx_glr_plot_tempest_dataset_001.png :class: sphx-glr-single-img .. rst-class:: sphx-glr-script-out .. code-block:: none Text(0.5, 1.0, 'Scatter plot') .. GENERATED FROM PYTHON SOURCE LINES 40-41 Plot all the data along the specified line .. GENERATED FROM PYTHON SOURCE LINES 41-45 .. code-block:: Python plt.figure(figsize=(8,6)) _ = TD.plotLine(0.0) plt.title('Line {}'.format(225401.0)) .. image-sg:: /examples/Data/images/sphx_glr_plot_tempest_dataset_002.png :alt: Line 225401.0 :srcset: /examples/Data/images/sphx_glr_plot_tempest_dataset_002.png :class: sphx-glr-single-img .. rst-class:: sphx-glr-script-out .. code-block:: none self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) Text(0.5, 1.0, 'Line 225401.0') .. GENERATED FROM PYTHON SOURCE LINES 46-47 Or, plot specific channels in the data .. GENERATED FROM PYTHON SOURCE LINES 47-51 .. code-block:: Python plt.figure(figsize=(8,6)) _ = TD.plot_data(system=0, channels=[0, 6, 18]) plt.title("3 channels of data") .. image-sg:: /examples/Data/images/sphx_glr_plot_tempest_dataset_003.png :alt: 3 channels of data :srcset: /examples/Data/images/sphx_glr_plot_tempest_dataset_003.png :class: sphx-glr-single-img .. rst-class:: sphx-glr-script-out .. code-block:: none self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) Text(0.5, 1.0, '3 channels of data') .. GENERATED FROM PYTHON SOURCE LINES 52-56 .. code-block:: Python plt.figure() _ = TD.pcolor(system=0) plt.title('Data as an array') .. image-sg:: /examples/Data/images/sphx_glr_plot_tempest_dataset_004.png :alt: Data as an array :srcset: /examples/Data/images/sphx_glr_plot_tempest_dataset_004.png :class: sphx-glr-single-img .. rst-class:: sphx-glr-script-out .. code-block:: none self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) Text(0.5, 1.0, 'Data as an array') .. GENERATED FROM PYTHON SOURCE LINES 57-89 .. code-block:: Python plt.figure() ax = TD.scatter2D(c=TD.data[:, TD.channel_index(system=0, channel=10)], equalize=True) plt.axis('equal') plt.title(f"scatter plot of channel {TD.channel_index(system=0, channel=10)}") with h5py.File('tdem.h5', 'w') as f: TD.createHdf(f, 'tdem') TD.writeHdf(f, 'tdem') with h5py.File('tdem.h5', 'r') as f: TD3 = TempestData.fromHdf(f['tdem']) with h5py.File('tdem.h5', 'r') as f: tdp = TempestData.fromHdf(f['tdem'], index=0) # #%% # # Obtain a line from the data set # # +++++++++++++++++++++++++++++++ # line = TD.line(0.0) # #%% # plt.figure() # _ = line.scatter2D() # plt.title('Channel') # #%% # plt.figure() # _ = line.plot_data(xAxis='index', log=10) # plt.title("All data along line") plt.show() .. image-sg:: /examples/Data/images/sphx_glr_plot_tempest_dataset_005.png :alt: scatter plot of channel 10 :srcset: /examples/Data/images/sphx_glr_plot_tempest_dataset_005.png :class: sphx-glr-single-img .. rst-class:: sphx-glr-script-out .. code-block:: none self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) self.n_components=2, self.nTimes=array([15]) .. rst-class:: sphx-glr-timing **Total running time of the script:** (0 minutes 3.608 seconds) .. _sphx_glr_download_examples_Data_plot_tempest_dataset.py: .. only:: html .. container:: sphx-glr-footer sphx-glr-footer-example .. container:: sphx-glr-download sphx-glr-download-jupyter :download:`Download Jupyter notebook: plot_tempest_dataset.ipynb ` .. container:: sphx-glr-download sphx-glr-download-python :download:`Download Python source code: plot_tempest_dataset.py ` .. container:: sphx-glr-download sphx-glr-download-zip :download:`Download zipped: plot_tempest_dataset.zip ` .. only:: html .. rst-class:: sphx-glr-signature `Gallery generated by Sphinx-Gallery `_