Data come from named list, which contains a Sample dataframe with the sample data, and an INFO dataframe with metadata.
Although there are a lot of optional arguments to this function, most are set to a logical default.
Usage
plotFluxPred(eList, fluxUnit = 3, fluxMax = NA, printTitle = TRUE,
oneToOneLine = TRUE, customPar = FALSE, col = "black", lwd = 1,
cex = 0.8, cex.axis = 1.1, cex.main = 1.1, tinyPlot = FALSE,
usgsStyle = FALSE, logScale = FALSE, randomCensored = FALSE, ...)Arguments
- eList
named list with at least the Sample and INFO dataframes
- fluxUnit
number representing entry in pre-defined fluxUnit class array.
printFluxUnitCheatSheet- fluxMax
number specifying the maximum value to be used on the vertical axis, default is NA (which allows it to be set automatically by the data)
- printTitle
logical variable if TRUE title is printed, if FALSE not printed (this is best for a multi-plot figure)
- oneToOneLine
inserts 1:1 line
- customPar
logical defaults to FALSE. If TRUE, par() should be set by user before calling this function (for example, adjusting margins with par(mar=c(5,5,5,5))). If customPar FALSE, EGRET chooses the best margins depending on tinyPlot.
- col
color of points on plot, see ?par 'Color Specification'
- lwd
number line width
- cex
numerical value giving the amount by which plotting symbols should be magnified
- cex.axis
magnification to be used for axis annotation relative to the current setting of cex
- cex.main
magnification to be used for main titles relative to the current setting of cex
- tinyPlot
logical variable if TRUE plot is designed to be small, if FALSE it is designed for page size, default is FALSE (not fully implemented yet)
- usgsStyle
logical option to use USGS style guidelines. Setting this option to TRUE does NOT guarantee USGS compliance. It will only change automatically generated labels.
- logScale
logical if TRUE x and y plotted in log axis
- randomCensored
logical. Show censored values as randomized.
- ...
arbitrary graphical parameters that will be passed to genericEGRETDotPlot function (see ?par for options)
Examples
eList <- Choptank_eList
# Water year:
plotFluxPred(eList)
plotFluxPred(eList, fluxUnit = 'poundsDay')
plotFluxPred(eList, logScale=TRUE)
# Graphs consisting of Jun-Aug
eList <- setPA(eList, paStart=6,paLong=3)
plotFluxPred(eList)
